BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H04SP1|AL426279
(809 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1755 1573 0.0
>3x_Contig1755
Length = 22936
Score = 1573 bits (791), Expect = 0.0
Identities = 802/809 (99%)
Strand = Plus / Minus
Query: 1 cttcatttcttcaagagtagatattaaagtaactttagctgtcaaatgacaagtgtgtgg 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 21931 cttcatttcttcaagagtagatattaaagtaactttagctgtaaaatgacaagtgtgtgg 21872
Query: 61 gaataccgtacagcataccagcagggcaagaagaattccaaataaataagaaattccaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21871 gaataccgtacagcataccagcagggcaagaagaattccaaataaataagaaattccaaa 21812
Query: 121 atcccagtacaatttccaatcgagatcagatttgttaaatacgaggcttgatccacaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21811 atcccagtacaatttccaatcgagatcagatttgttaaatacgaggcttgatccacaaaa 21752
Query: 181 gaatagtgctgcmatcccaaatgatgttgaaaaatagaataacctttgataagtggttct 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21751 gaatagtgctgcaatcccaaatgatgttgaaaaatagaataacctttgataagtggttct 21692
Query: 241 taaccaatgcgtgaaaattgcagctaagaaaagtcctagaaaaaggataccaccagcgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21691 taaccaatgcgtgaaaattgcagctaagaaaagtcctagaaaaaggataccaccagcgtt 21632
Query: 301 tgtagcggctggttttgtagctgtagatacaaaccatattaaactggaatatcccatccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21631 tgtagcggctggttttgtagctgtagatacaaaccatattaaactggaatatcccatccc 21572
Query: 361 tatggcggcacctaagatagactgchatgatagttctaattgtacaccaaccgttcttga 420
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 21571 tatggcggcacctaagatagactgcaatgatagttctaattgtacaccaaccgttcttga 21512
Query: 421 tggatggtgaattaaaacagccaacggtaaaanatatctgtwttctccaccgaaccagtt 480
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 21511 tggatggtgaattaaaacagccaacggtaaaaaatatctgtattctccaccgaaccagtt 21452
Query: 481 accagcaggtctgataagacatagaatgtttgcnacaaagattgctatccaatatttgac 540
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 21451 accagcaggtctgataagacatagaatgtttgcaacaaagattgctatccaatatttgac 21392
Query: 541 gatatgtttccaatattttctagtgcccttcggatcgatgtgtgggaacaaaggctttcg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21391 gatatgtttccaatattttctagtgcccttcggatcgatgtgtgggaacaaaggctttcg 21332
Query: 601 agtttcatcgaaatggtctacatcagtcggatcagttggttgthatcgttcgtatccagt 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 21331 agtttcatcgaaatggtctacatcagtcggatcagttggttgtaatcgttcgtatccagt 21272
Query: 661 atagactggatcgaagaacccatttctcaattcttccaacccaaaactttctaaattctc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21271 atagactggatcgaagaacccatttctcaattcttccaacccaaaactttctaaattctc 21212
Query: 721 ccattttttcccctccaacaatttatttaatttcatctgagacaggttgatcctagaatg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21211 ccattttttcccctccaacaatttatttaatttcatctgagacaggttgatcctagaatg 21152
Query: 781 agaggtgctgatgtcttgctcggattgac 809
|||||||||||||||||||||||||||||
Sbjct: 21151 agaggtgctgatgtcttgctcggattgac 21123
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5944
Number of Sequences: 1807
Number of extensions: 5944
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 809
length of database: 10,358,551
effective HSP length: 16
effective length of query: 793
effective length of database: 10,329,639
effective search space: 8191403727
effective search space used: 8191403727
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (99.9 bits)